Nbi_g02409 (EMB1956, Hsp88.1,...)


Aliases : EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88

Description : chaperone *(Hsp90) & original description: none


Gene families : OG0000167 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02409

Target Alias Description ECC score Gene Family Method Actions
Adi_g108744 EMB1956,... chaperone *(Hsp90) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06093 EMB1956,... chaperone *(Hsp90) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037087 EMB1956,... chaperone *(Hsp90) & original description: CDS=173-2464 0.04 OrthoFinder output from all 47 species
Ceric.27G012500.1 EMB1956,... chaperone *(Hsp90) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g06601 EMB1956,... chaperone *(Hsp90) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09046 EMB1956,... chaperone *(Hsp90) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11580 EMB1956,... chaperone *(Hsp90) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g50300.1 AtHsp90.7,... chaperone (Hsp90) 0.03 OrthoFinder output from all 47 species
Msp_g06819 HSP81-3,... chaperone *(Hsp90) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06703 No alias chaperone *(Hsp90) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28566 No alias chaperone *(Hsp90) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08989 EMB1956,... chaperone *(Hsp90) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22958 EMB1956,... chaperone *(Hsp90) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02844 EMB1956,... chaperone *(Hsp90) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
MF GO:0140662 ATP-dependent protein folding chaperone IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001404 Hsp90_fam 310 780
IPR003594 HATPase_C 145 306
No external refs found!