Aliases : ATCSP2, GRP2, CSDP2, CSP2
Description : cold-responsive mRNA chaperone *(CSD) & original description: none
Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g02715 | |
| Cluster | HCCA: Cluster_175 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_18506 | ATCSP3, CSP3 | RNA chaperone (CSP). mRNA chaperone (CSD) | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g05853 | ATCSP2, GRP2, CSDP2, CSP2 | cold-responsive mRNA chaperone *(CSD) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20698 | ATCSP2, GRP2, CSDP2, CSP2 | cold-responsive mRNA chaperone *(CSD) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0173.g024476 | ATCSP3, CSP3 | cold-responsive mRNA chaperone *(CSD) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo405045 | ATCRE1, WOL,... | External stimuli response.temperature.Csd... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g16263 | ATCSP2, GRP2, CSDP2, CSP2 | cold-responsive mRNA chaperone *(CSD) & original... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| No external refs found! |
