Aliases : ATRBP31, CP31, ATRBP33, RBP31
Description : not classified & original description: none
Gene families : OG0000715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000715_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00197820 | evm_27.TU.AmTr_v1... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00008p00202090 | evm_27.TU.AmTr_v1... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00032260 | PDE322, CP33,... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00142700 | ATRBP31, CP31,... | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00148p00072380 | evm_27.TU.AmTr_v1... | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00166p00060690 | ATRBP31, CP31,... | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| AT2G35410 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT2G37220 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G52150 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G52380 | PDE322, CP33 | chloroplast RNA-binding protein 33 | 0.09 | OrthoFinder output from all 47 species | |
| AT4G24770 | ATRBP31, CP31,... | 31-kDa RNA binding protein | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g019289 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022371 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g10264 | ATRBP31, CP31,... | plastidial ribonucleoprotein *(CP33a) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12603 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g39448 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g05873 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07067 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g07142 | ATRBP31, CP31,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g14081 | ATRBP31, CP31,... | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene25641.t1 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0017.g014465 | ATRBP31, CP31,... | not classified & original description: CDS=173-1078 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0037.g026033 | No alias | not classified & original description: CDS=1-825 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0159.g053948 | ATRBP31, CP31,... | not classified & original description: CDS=143-1057 | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g20170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G096500.1 | ATRBP31, CP31,... | not classified & original description: pacid=50595915... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.38G067800.1 | ATRBP31, CP31,... | not classified & original description: pacid=50580282... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g21785 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g00421 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g05227 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g00942 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g05650 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g10561 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01007596001 | CP31B | RNA processing.organelle machineries.RNA... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01013146001 | No alias | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025697001 | No alias | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01027917001 | No alias | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01032039001 | No alias | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032361001 | CP31B | RNA processing.organelle machineries.RNA... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_05747 | PDE322, CP33 | component psPSRP2 of small ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| Gb_28108 | CP31B | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_29798 | No alias | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_32176 | No alias | component psPSRP2 of small ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
| Gb_33449 | No alias | component psPSRP2 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g57010.1 | LOC_Os02g57010 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os03g25960.1 | LOC_Os03g25960 | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g50110.1 | LOC_Os04g50110 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os07g06450.1 | PDE322, CP33,... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g44290.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g10760.1 | LOC_Os09g10760 | component psPSRP2 of small ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g39180.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.06 | OrthoFinder output from all 47 species | |
| Len_g16035 | CP31B | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g57236 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10434075g0010 | CP31B | component psPSRP2 of small ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| MA_136464g0010 | ATRBP31, CP31,... | 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.09 | OrthoFinder output from all 47 species | |
| MA_320479g0010 | No alias | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| MA_474396g0010 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.04 | OrthoFinder output from all 47 species | |
| MA_482994g0010 | CP31B | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.08 | OrthoFinder output from all 47 species | |
| MA_65183g0010 | No alias | component psPSRP2 of small ribosomal subunit proteome | 0.09 | OrthoFinder output from all 47 species | |
| Mp2g13800.1 | No alias | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.08 | OrthoFinder output from all 47 species | |
| Mp8g03420.1 | No alias | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04850 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03561 | CP31B | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g06962 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19962 | CP31B | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g19963 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g27196 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g02206 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06203 | No alias | plastidial ribonucleoprotein *(CP33a) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g33947 | No alias | plastidial ribonucleoprotein *(CP33a) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c12_9890V3.1 | Pp3c12_9890 | chloroplast RNA-binding protein 29 | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02835 | ATRBP31, CP31,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g18180 | ATRBP31, CP31,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0062.g015482 | ATRBP31, CP31,... | not classified & original description: CDS=157-1524 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0122.g021464 | CP31B | not classified & original description: CDS=19-840 | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g06842 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g23920 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g006940.4.1 | PDE322, CP33,... | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc03g111840.3.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.1 | OrthoFinder output from all 47 species | |
| Solyc04g074750.3.1 | Solyc04g074750 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc08g076840.3.1 | Solyc08g076840 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc09g007850.3.1 | Solyc09g007850 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc10g086150.2.1 | Solyc10g086150 | 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g07687 | ATRBP31, CP31,... | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g08465 | ATRBP31, CP31,... | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g05046 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001824_P002 | Zm00001e001824 | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007101_P002 | Zm00001e007101 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e010844_P001 | Zm00001e010844 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016211_P001 | Zm00001e016211 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022086_P002 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032835_P001 | PDE322, CP33,... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e033465_P001 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e033636_P003 | Zm00001e033636 | component psPSRP2 of small ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e035630_P001 | Zm00001e035630 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004089 | carbonate dehydratase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010257 | NADH dehydrogenase complex assembly | IEP | HCCA |
| BP | GO:0010258 | NADH dehydrogenase complex (plastoquinone) assembly | IEP | HCCA |
| BP | GO:0010275 | NAD(P)H dehydrogenase complex assembly | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| BP | GO:0017038 | protein import | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
| BP | GO:0034311 | diol metabolic process | IEP | HCCA |
| BP | GO:0034312 | diol biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| No external refs found! |
