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  5. Nbi_g02975

Nbi_g02975 (RTNLB2, BTI2)


Aliases : RTNLB2, BTI2

Description : ER-tubule curvature-inducing protein *(Reticulon) & original description: none


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02975
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00230610 evm_27.TU.AmTr_v1... Reticulon-like protein B10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00017p00194840 BTI1, RTNLB1,... Reticulon-like protein B1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00178230 evm_27.TU.AmTr_v1... Reticulon-like protein B5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G10260 No alias Reticulon family protein 0.02 OrthoFinder output from all 47 species
AT4G01230 No alias Reticulon family protein 0.02 OrthoFinder output from all 47 species
Adi_g051483 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Aev_g22824 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Als_g42720 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Cba_g08417 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cba_g31464 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ceric.02G059800.1 BTI1, RTNLB1,... ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Ceric.10G041900.1 Ceric.10G041900 ER-tubule curvature-inducing protein *(Reticulon) &... 0.05 OrthoFinder output from all 47 species
Cre06.g308950 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01034020001 No alias Reticulon-like protein B12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g16620.1 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
LOC_Os04g57420.1 LOC_Os04g57420 ER-associated protein (Reticulon) 0.05 OrthoFinder output from all 47 species
Lfl_g19664 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Lfl_g22278 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Sam_g48835 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Smo113819 RTNLB2, BTI2 Reticulon-like protein B16 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g095200.3.1 Solyc01g095200 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Solyc06g036430.3.1 RTNLB2, BTI2,... ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Solyc09g013110.3.1 Solyc09g013110 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Spa_g02967 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Spa_g08318 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.01 OrthoFinder output from all 47 species
Spa_g48899 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Tin_g14300 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Zm00001e016413_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 63 216
No external refs found!