Aliases : ATSS4, SS4, SSIV
Description : starch synthase *(SS4) & original description: none
Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g03185 | |
| Cluster | HCCA: Cluster_128 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g05131 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05284 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene32633.t1 | ATSS3, SS3,... | starch synthase *(SS3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000667 | ATSS4, SS4, SSIV | not classified & original description: CDS=177-2066 | 0.05 | OrthoFinder output from all 47 species | |
| Cre06.g282000 | ATSS3, SS3 | Carbohydrate metabolism.starch... | 0.02 | OrthoFinder output from all 47 species | |
| Cre16.g663850 | ATSS4, SS4, SSIV | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08981 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g53310.1 | ATSS3, SS3,... | starch synthase (SSIII) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g49747 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g29362 | No alias | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo154776 | ATSS3, SS3 | Carbohydrate metabolism.starch... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016757 | glycosyltransferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| No external refs found! |
