Nbi_g03640


Description : component *(GID9) of GID ubiquitination complex & original description: none


Gene families : OG0003836 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003836_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03640

Target Alias Description ECC score Gene Family Method Actions
Aop_g13056 No alias component *(GID9) of GID ubiquitination complex &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001471.8 No alias Protein MAEA homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g01428 No alias component *(GID9) of GID ubiquitination complex &... 0.03 OrthoFinder output from all 47 species
Solyc04g010120.3.1 Solyc04g010120 component GID9 of ubiquitin protein ligase complex 0.04 OrthoFinder output from all 47 species
Spa_g01959 No alias component *(GID9) of GID ubiquitination complex &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0070449 elongin complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 175 314
No external refs found!