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  5. Nbi_g03672

Nbi_g03672


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03672

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267180 BCS1,... AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00014p00241930 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00244830 AATP1,... AAA-ATPase At3g50940 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00036p00176790 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G28510 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28520 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Adi_g031480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g55732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015104 No alias not classified & original description: CDS=1-1578 0.02 OrthoFinder output from all 47 species
Cba_g22117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G052300.1 Ceric.01G052300 not classified & original description: pacid=50592955... 0.03 OrthoFinder output from all 47 species
Ceric.06G084000.1 Ceric.06G084000 not classified & original description: pacid=50619247... 0.03 OrthoFinder output from all 47 species
Ceric.19G071100.1 Ceric.19G071100 not classified & original description: pacid=50575396... 0.05 OrthoFinder output from all 47 species
Ehy_g01247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001352001 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01008088001 No alias AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018890001 BCS1 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_16063 No alias AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g19260.1 AATP1, LOC_Os01g19260 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g45450.1 LOC_Os01g45450 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os03g02330.1 LOC_Os03g02330 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g38800.1 LOC_Os03g38800 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g58800.1 AATP1, LOC_Os03g58800 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51130.1 BCS1, LOC_Os05g51130 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48250.1 LOC_Os06g48250 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os07g09420.1 LOC_Os07g09420 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28137.1 AATP1, LOC_Os12g28137 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g28177.1 AATP1, LOC_Os12g28177 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g28590.1 AATP1, LOC_Os12g28590 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g44190.1 AATP1, LOC_Os12g44190 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10435468g0020 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_1798304g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_604139g0010 AATP1 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_69227g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g18570.1 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g11419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002692 No alias not classified & original description: CDS=1-1494 0.03 OrthoFinder output from all 47 species
Solyc02g087540.3.1 Solyc02g087540 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g033790.4.1 BCS1, Solyc03g033790 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g055810.1.1 Solyc12g055810 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g42317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003357_P001 AATP1, Zm00001e003357 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e003358_P001 AATP1, Zm00001e003358 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e011416_P001 Zm00001e011416 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e012527_P001 Zm00001e012527 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e013138_P001 Zm00001e013138 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e027961_P001 Zm00001e027961 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 29 120
IPR003959 ATPase_AAA_core 246 383
No external refs found!