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  5. Nbi_g03822

Nbi_g03822 (IDD2, AtIDD2)


Aliases : IDD2, AtIDD2

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03822
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00106830 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT1G03840 MGP C2H2 and C2HC zinc fingers superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g60888 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g21518 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g21742 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04941 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g47762 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01010961001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01025166001 JKD RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os03g13400.1 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_10426334g0010 MGP C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Pnu_g12982 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0160.g023894 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc04g008500.4.1 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g15231 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g52266 No alias C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g03495 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 174 196
No external refs found!