Aliases : PGY1
Description : component *(uL1) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001297_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g03987 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00167280 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00163590 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G08360 | No alias | Ribosomal protein L1p/L10e family | 0.07 | OrthoFinder output from all 47 species | |
| AT2G27530 | PGY1 | Ribosomal protein L1p/L10e family | 0.04 | OrthoFinder output from all 47 species | |
| AT5G22440 | No alias | Ribosomal protein L1p/L10e family | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g36055 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g29346 | PGY1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38886 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g02409 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016098 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020697.31 | No alias | 60S ribosomal protein L10a OS=Oryza sativa subsp. japonica | 0.06 | OrthoFinder output from all 47 species | |
| Cre02.g101350 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g03072 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01033841001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036128001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_28506 | No alias | component RPL10a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g64090.1 | LOC_Os01g64090 | component RPL10a of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g21660.1 | LOC_Os02g21660 | component RPL10a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g44380.1 | LOC_Os08g44380 | component RPL10a of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| MA_71921g0010 | No alias | component RPL10a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g07870.1 | No alias | component RPL10a of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g00232 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g18372 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c20_19190V3.1 | Pp3c20_19190 | Ribosomal protein L1p/L10e family | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g26683 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g27325 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0106.g020220 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12736 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g26155 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Smo230302 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g009520.4.1 | Solyc01g009520 | component RPL10a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g074300.4.1 | Solyc06g074300 | component RPL10a of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g068420.2.1 | Solyc11g068420 | component RPL10a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g08346 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08347 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g08353 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53937 | PGY1 | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g39928 | No alias | component *(uL1) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019205_P001 | Zm00001e019205 | component RPL10a of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e022063_P001 | Zm00001e022063 | component RPL10a of LSU proteome component | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| CC | GO:0000781 | chromosome, telomeric region | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| CC | GO:0098687 | chromosomal region | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028364 | Ribosomal_L1/biogenesis | 21 | 210 |
| No external refs found! |
