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  5. Nbi_g04025

Nbi_g04025


Description : not classified & original description: none


Gene families : OG0000041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04025
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Aev_g22505 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13768 ATHSP22.0 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g43612 HSP17.6II class-C-II small heat-shock-responsive protein &... 0.04 OrthoFinder output from all 47 species
Aob_g19171 ATHSP17.4, HSP17.4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G058300.1 HSP18.2, Ceric.20G058300 not classified & original description: pacid=50567508... 0.03 OrthoFinder output from all 47 species
Ceric.32G017800.1 Ceric.32G017800 not classified & original description: pacid=50597672... 0.04 OrthoFinder output from all 47 species
Dac_g22986 ATHSP17.4, HSP17.4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37729 HSP17.6II class-C-II small heat-shock-responsive protein &... 0.04 OrthoFinder output from all 47 species
GSVIVT01016404001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_10426614g0010 HSP18.2 class-C-I small heat-shock-responsive protein 0.02 OrthoFinder output from all 47 species
MA_10432788g0010 HSP18.2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g00787 HSP18.2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04583 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05597 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c8_9380V3.1 ATHSP17.4,... HSP20-like chaperones superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g00223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24404 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g26197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40526 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61454 HSP18.2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015806 No alias not classified & original description: CDS=162-497 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018345 No alias not classified & original description: CDS=1-426 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020585 No alias not classified & original description: CDS=172-525 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021736 No alias not classified & original description: CDS=1-372 0.06 OrthoFinder output from all 47 species
Sam_g30979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g080410.3.1 Solyc02g080410 class-C-V small heat-shock-responsive protein 0.02 OrthoFinder output from all 47 species
Solyc10g086680.1.1 Solyc10g086680 18.2 kDa class I heat shock protein OS=Medicago sativa... 0.03 OrthoFinder output from all 47 species
Spa_g13170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12447 ATHSP17.4, HSP17.4 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 23 124
No external refs found!