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  5. Nbi_g04233

Nbi_g04233 (AL2)


Aliases : AL2

Description : methylation reader Alfin of PRC1 complex & original description: none


Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04233

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00155940 AL5,... RNA biosynthesis.transcriptional activation.Alfin-like... 0.03 OrthoFinder output from all 47 species
Adi_g021590 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Adi_g102186 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g04965 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g08659 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62570.t1 AL2, Aspi01Gene62570 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0301.g063715 AL2 methylation reader Alfin of PRC1 complex & original... 0.04 OrthoFinder output from all 47 species
Dde_g00322 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08950 AL5 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21080 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g66420.1 AL5, LOC_Os01g66420 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g01104 AL4 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Lfl_g11879 AL2 methylation reader Alfin of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g13361 AL1 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g17589 AL4 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g49107 AL2 methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g30334 No alias methylation reader Alfin of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e027483_P002 AL1, Zm00001e027483 Alfin-like transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035527_P001 AL5, Zm00001e035527 Alfin-like transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR021998 Alfin_N 9 134
IPR019787 Znf_PHD-finger 188 237
No external refs found!