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  5. Nbi_g04633

Nbi_g04633 (RABA2b, ATRAB-A2B,...)


Aliases : RABA2b, ATRAB-A2B, ATRABA2B, RAB-A2B

Description : A-class RAB GTPase & original description: none


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04633

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00103890 AtRABA6b,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
AMTR_s00108p00139240 AtRABA1f,... Ras-related protein RABA1f OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G09630 ATRABA2A,... RAB GTPase 11C 0.02 OrthoFinder output from all 47 species
Aev_g17596 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18147 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00731 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30591 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08482 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10560 ATRABA2A,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09683 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22467 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42193 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0158.g053866 ATRABA2A,... A-class RAB GTPase & original description: CDS=282-950 0.03 OrthoFinder output from all 47 species
Cba_g00782 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.97 AtRABA1e, RABA1e Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Cre03.g189250 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Dac_g05558 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27746 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00471 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014250001 AtRABA1f, RABA1f Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
LOC_Os03g62600.1 ATRABA2A,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os05g01480.1 ATRABA2A,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os09g15790.1 AtRABA1f,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Len_g03672 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Len_g15896 ATRABA2A,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16053 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28666 AtRABA5d, RABA5d not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18286 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
MA_15386g0010 AtRABA1f, RABA1f A-class RAB GTPase 0.01 OrthoFinder output from all 47 species
MA_18685g0010 AtRABA5d, RABA5d A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Msp_g09974 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14192 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02175 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19758 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08711 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61287 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011299 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=186-836 0.03 OrthoFinder output from all 47 species
Solyc12g014080.2.1 AtRABA1f,... A-class RAB GTPase 0.01 OrthoFinder output from all 47 species
Spa_g07580 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16289 ATRABA2A,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27440 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003625_P001 ATRABA5C, ARA4,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e020213_P001 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e027669_P001 ATRABA2A,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e030680_P001 ATHSGBP, RABA1d,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e031368_P002 RAB-A2C,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e032148_P001 ATRABA1B, RAB11,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e033825_P001 AtRABA1f,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 21 181
No external refs found!