Description : RNA chaperone *(RZ1) & original description: none
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g04953 | |
| Cluster | HCCA: Cluster_154 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g021389 | GR-RBP3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g11980 | No alias | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62580 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01001672001 | ATRZ-1A | Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g12890 | No alias | RNA chaperone *(RZ1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g15237 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10113 | ATRZ-1A | RNA chaperone *(RZ1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| No external refs found! |
