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  5. Nbi_g05160

Nbi_g05160


Description : not classified & original description: none


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05160
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT3G48940 No alias Remorin family protein 0.03 OrthoFinder output from all 47 species
Adi_g014534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g50861 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70234 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Azfi_s0088.g042528 No alias not classified & original description: CDS=376-963 0.02 OrthoFinder output from all 47 species
Azfi_s0129.g048972 No alias not classified & original description: CDS=564-1205 0.03 OrthoFinder output from all 47 species
Ceric.06G045700.1 Ceric.06G045700 not classified & original description: pacid=50619672... 0.1 OrthoFinder output from all 47 species
Dcu_g42996 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g48279 No alias not classified & original description: none 0.21 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.06 OrthoFinder output from all 47 species
GSVIVT01026869001 No alias Uncharacterized protein At3g61260 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g02040.1 LOC_Os03g02040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45070.1 LOC_Os04g45070 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 95.9) 0.02 OrthoFinder output from all 47 species
Len_g08631 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Len_g57393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g00941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06649 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Msp_g43674 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Msp_g43675 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g05258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08904 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Ppi_g09748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005937 No alias not classified & original description: CDS=1-372 0.03 OrthoFinder output from all 47 species
Sam_g20100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g048820.3.1 Solyc05g048820 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 94.0) 0.02 OrthoFinder output from all 47 species
Spa_g00381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38180 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Spa_g47427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 105 209
No external refs found!