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  5. Nbi_g05274

Nbi_g05274


Description : not classified & original description: none


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05274
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Ala_g07082 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g02366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15641 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24289 BBD1, ATBBD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10487 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g21453 BBD1, ATBBD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os08g26870.1 LOC_Os08g26870 Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Len_g43856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59697 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31557 BBD1, ATBBD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33906 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02503 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09798 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05101 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo442102 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e018013_P001 Zm00001e018013 Bifunctional nuclease 1 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 149 252
No external refs found!