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  5. Nbi_g05276

Nbi_g05276


Description : phosphatase *(PBCP) & original description: none


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05276
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT2G30170 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
Ala_g06302 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32280 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009920 No alias not classified & original description: CDS=16-1062 0.03 OrthoFinder output from all 47 species
Cba_g68354 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Ceric.1Z173900.1 Ceric.1Z173900 phosphatase *(PBCP) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g09847 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g33331 No alias phosphatase *(PBCP) & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g26968 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02459 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024641001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
LOC_Os01g07090.1 LOC_Os01g07090 photosynthetic acclimation PBCP phosphatase 0.06 OrthoFinder output from all 47 species
Len_g20278 No alias phosphatase *(PBCP) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g17211 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05138 No alias phosphatase *(PBCP) & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g04619 No alias phosphatase *(PBCP) & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g24669 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g105020.3.1 Solyc01g105020 Probable protein phosphatase 2C 71 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Solyc06g007350.4.1 Solyc06g007350 photosynthetic acclimation PBCP phosphatase 0.07 OrthoFinder output from all 47 species
Spa_g14768 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25213 No alias phosphatase *(PBCP) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016822_P004 Zm00001e016822 photosynthetic acclimation PBCP phosphatase 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 164 347
No external refs found!