Nbi_g05481 (EST3, MRP4, ATMRP4, ABCC4)

Aliases : EST3, MRP4, ATMRP4, ABCC4

Description : subfamily ABCC transporter & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g05481

Target	Alias	Description	ECC score	Gene Family Method
Als_g16130	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Gb_37462	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
MA_10434414g0010	ABCC1, ATABCC1,...	ABC transporter C family member 1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018952	ABCC1, ATABCC1,...	subfamily ABCC transporter & original description: CDS=3252-4655	0.03	OrthoFinder output from all 47 species
Sam_g45137	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc09g075020.3.1	EST3, MRP4,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	321	586
IPR011527	ABC1_TM_dom	958	1193
IPR003439	ABC_transporter-like_ATP-bd	1291	1439
IPR003439	ABC_transporter-like_ATP-bd	651	783

External Links

No external refs found!