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  5. Nbi_g05835

Nbi_g05835


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05835
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Adi_g004526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056821 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g068784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13180 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17643 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18741 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21042 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24714 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28362 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31182 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32674 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38788 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39105 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16854 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23995 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17592.t1 Aspi01Gene17592 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.03 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.03 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.03 OrthoFinder output from all 47 species
Ceric.25G022800.1 Ceric.25G022800 not classified & original description: pacid=50594192... 0.04 OrthoFinder output from all 47 species
Ceric.25G042100.1 Ceric.25G042100 not classified & original description: pacid=50593153... 0.03 OrthoFinder output from all 47 species
Ceric.28G037300.1 Ceric.28G037300 not classified & original description: pacid=50570602... 0.03 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.03 OrthoFinder output from all 47 species
Dac_g04912 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g05753 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32949 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37184 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015461001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.03 OrthoFinder output from all 47 species
LOC_Os02g46980.1 LOC_Os02g46980 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.02 OrthoFinder output from all 47 species
Len_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10317671g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Msp_g07530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08010 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g37318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39681 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63872 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g06375 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g096680.1.1 REME1, Solyc12g096680 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Spa_g02061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11102 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17625 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 413 459
IPR002885 Pentatricopeptide_repeat 106 153
IPR002885 Pentatricopeptide_repeat 515 562
IPR002885 Pentatricopeptide_repeat 208 255
IPR002885 Pentatricopeptide_repeat 311 357
IPR002885 Pentatricopeptide_repeat 616 663
IPR002885 Pentatricopeptide_repeat 693 718
IPR002885 Pentatricopeptide_repeat 722 748
IPR002885 Pentatricopeptide_repeat 486 512
IPR002885 Pentatricopeptide_repeat 285 307
IPR002885 Pentatricopeptide_repeat 385 412
No external refs found!