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  5. Nbi_g05898

Nbi_g05898 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05898
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267110 OSB1,... Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00155620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00033910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49740... 0.02 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.05 OrthoFinder output from all 47 species
Adi_g117556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g74881 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.06 OrthoFinder output from all 47 species
Ceric.30G017300.1 Ceric.30G017300 not classified & original description: pacid=50608904... 0.05 OrthoFinder output from all 47 species
Dac_g07482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18764 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06429 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08908 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g54678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14464 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g34587 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Spa_g14604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15123 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g19054 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05462 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05859 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17765 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 488 536
IPR002885 Pentatricopeptide_repeat 286 333
IPR002885 Pentatricopeptide_repeat 388 435
IPR002885 Pentatricopeptide_repeat 152 180
IPR002885 Pentatricopeptide_repeat 563 587
IPR002885 Pentatricopeptide_repeat 188 218
IPR002885 Pentatricopeptide_repeat 362 385
IPR002885 Pentatricopeptide_repeat 88 115
No external refs found!