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  5. Nbi_g06182

Nbi_g06182 (CRF3)


Aliases : CRF3

Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06182
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266920 RAP2.11,... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AT1G63030 ddf2 Integrase-type DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.05 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g056328 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g119481 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g10917 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g58077 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene65343.t1 Aspi01Gene65343 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18523 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.24G043200.1 Ceric.24G043200 not classified & original description: pacid=50629001... 0.04 OrthoFinder output from all 47 species
Dcu_g18823 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10804 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Gb_26419 DRN-LIKE, ESR2,... transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Gb_41445 No alias transcription factor (DREB) 0.07 OrthoFinder output from all 47 species
LOC_Os03g08490.1 RAP2.12, LOC_Os03g08490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g06770.2 ERF110, LOC_Os11g06770 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os12g41060.1 LOC_Os12g41060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g06554 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.07 OrthoFinder output from all 47 species
MA_10427743g0020 TMO3, CRF2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2040g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_5805979g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_65190g0010 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
MA_65877g0010 No alias Dehydration-responsive element-binding protein 3... 0.08 OrthoFinder output from all 47 species
MA_7960347g0010 TMO3, CRF2 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
MA_99821g0010 TMO3, CRF2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Msp_g04750 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Nbi_g07909 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g26909 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06457 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20605 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33759 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g05046 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g12543 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22071 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g34364 DEAR1, CEJ1, ATERF#011 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g41606 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56408 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012792 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Solyc01g090370.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g30191 No alias subgroup ERF-I transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g52658 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g00486 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g20867 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39331 LEP not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e000609_P001 RAP2.2, Zm00001e000609 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e023748_P001 RAP2.12, Zm00001e023748 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Zm00001e025064_P001 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e032434_P001 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e033537_P001 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 151 200
No external refs found!