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  5. Nbi_g06190

Nbi_g06190 (VFB4, SKIP2)


Aliases : VFB4, SKIP2

Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06190

Target Alias Description ECC score Gene Family Method Actions
AT3G50080 VFB2 VIER F-box proteine 2 0.03 OrthoFinder output from all 47 species
Aev_g02301 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g05220 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.19G024600.1 VFB4, SKIP2,... substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dcu_g07048 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
LOC_Os04g42670.1 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
MA_152370g0010 VFB2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_154760g0010 VFB2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_179294g0010 VFB4, SKIP2 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
MA_95728g0010 VFB3 component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
MA_9863496g0010 VFB1 component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Msp_g03956 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g25908 No alias substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e033486_P001 VFB1, Zm00001e033486 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 329 342
IPR001611 Leu-rich_rpt 138 161
IPR041567 COI1_F-box 52 89
No external refs found!