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  5. Nbi_g06298

Nbi_g06298 (EMB2780)


Aliases : EMB2780

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06298

Target Alias Description ECC score Gene Family Method Actions
AT5G63960 EMB2780 DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011315 ATREV3, REV3 not classified & original description: CDS=841-2013 0.02 OrthoFinder output from all 47 species
Ceric.29G084300.1 EMB2780, Ceric.29G084300 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Gb_15180 EMB2780 component POLD1 of DNA polymerase delta complex 0.03 OrthoFinder output from all 47 species
Msp_g14841 EMB2780 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_24900V3.1 Pp3c4_24900 No annotation 0.01 OrthoFinder output from all 47 species
Sam_g25356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g081250.3.1 EMB2780, Solyc10g081250 component POLD1 of DNA polymerase delta complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR025687 Znf-C4pol 997 1068
IPR006133 DNA-dir_DNA_pol_B_exonuc 120 463
IPR006134 DNA-dir_DNA_pol_B_multi_dom 527 960
No external refs found!