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  5. Nbi_g06770

Nbi_g06770


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06770

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00098p00167700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g50390,... 0.04 OrthoFinder output from all 47 species
Aob_g28660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07680 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20859 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g49149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.39G023200.1 CRR2, Ceric.39G023200 not classified & original description: pacid=50582462... 0.04 OrthoFinder output from all 47 species
Dcu_g47811 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g12101 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012461001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Len_g44148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_4940V3.1 Pp3c17_4940 organellar single-stranded DNA binding protein 3 0.01 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003613 No alias not classified & original description: CDS=279-3914 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007679 OTP86 not classified & original description: CDS=1-4497 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008337 No alias not classified & original description: CDS=1-3675 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011483 No alias not classified & original description: CDS=1-2124 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022672 No alias not classified & original description: CDS=1-3558 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025782 No alias not classified & original description: CDS=1-2394 0.03 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g45851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105614 CRR2 Pentatricopeptide repeat-containing protein At3g02330,... 0.05 OrthoFinder output from all 47 species
Tin_g05124 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006869 lipid transport IEP HCCA
BP GO:0015850 organic hydroxy compound transport IEP HCCA
BP GO:0015918 sterol transport IEP HCCA
BP GO:0032365 intracellular lipid transport IEP HCCA
BP GO:0032366 intracellular sterol transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 255 277
IPR002885 Pentatricopeptide_repeat 456 480
IPR002885 Pentatricopeptide_repeat 154 176
IPR002885 Pentatricopeptide_repeat 80 106
IPR002885 Pentatricopeptide_repeat 381 428
IPR002885 Pentatricopeptide_repeat 180 225
IPR002885 Pentatricopeptide_repeat 280 329
No external refs found!