Nbi_g06810 (SOL1)


Aliases : SOL1

Description : TCX/CPP-type transcription factor & original description: none


Gene families : OG0001700 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001700_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06810
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271710 TSO1, ATTSO1,... RNA biosynthesis.transcriptional activation.CPP1-like... 0.03 OrthoFinder output from all 47 species
AMTR_s00042p00022530 TSO1, ATTSO1,... RNA biosynthesis.transcriptional activation.CPP1-like... 0.02 OrthoFinder output from all 47 species
AT4G14770 TCX2, ATTCX2 TESMIN/TSO1-like CXC 2 0.03 OrthoFinder output from all 47 species
Als_g14241 TSO1, ATTSO1 TCX/CPP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Als_g47414 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g07596 SOL1 TCX/CPP-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0058.g034433 TCX2, ATTCX2 TCX/CPP-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046064 SOL1 TCX/CPP-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.16G002900.1 TCX2, ATTCX2,... TCX/CPP-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.37G017200.1 TSO1, ATTSO1,... TCX/CPP-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g21027 SOL1 TCX/CPP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08956 TCX2, ATTCX2 TCX/CPP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g13047 SOL1 TCX/CPP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018021001 TCX2, ATTCX2 RNA biosynthesis.transcriptional activation.CPP1-like... 0.03 OrthoFinder output from all 47 species
LOC_Os03g43730.1 TCX2, ATTCX2,... CPP1-like transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os05g51040.1 LOC_Os05g51040 CPP1-like transcription factor 0.01 OrthoFinder output from all 47 species
MA_15033g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_33846g0010 TCX2, ATTCX2 CPP1-like transcription factor 0.04 OrthoFinder output from all 47 species
Mp2g11520.1 TCX2, ATTCX2 CPP1-like transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g31624 TCX2, ATTCX2 TCX/CPP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007665 TCX2, ATTCX2 TCX/CPP-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g38475 No alias TCX/CPP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29190 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g50005 SOL1 TCX/CPP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10278 SOL1 TCX/CPP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30555 SOL1 TCX/CPP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005172 CRC 739 773
IPR005172 CRC 653 688
No external refs found!