Nbi_g06876 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06876

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00182540 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00110050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G33760 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.03 OrthoFinder output from all 47 species
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G40410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g008420 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24374 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36543 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05719 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26572 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g32336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54705 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g55325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16819 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16552.t1 EMB2261, Aspi01Gene16552 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16559.t1 EMB2261, Aspi01Gene16559 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33635.t1 Aspi01Gene33635 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47602.t1 Aspi01Gene47602 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66061.t3 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044128 No alias not classified & original description: CDS=1-2508 0.05 OrthoFinder output from all 47 species
Azfi_s0125.g048584 CRR22 not classified & original description: CDS=1-1611 0.06 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.23G059700.1 CRR22, Ceric.23G059700 not classified & original description: pacid=50609689... 0.03 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.05 OrthoFinder output from all 47 species
Dac_g06637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36940 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g08260 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08294 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17305 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48673 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05349 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g17539 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21990 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g39055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47958 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.03 OrthoFinder output from all 47 species
GSVIVT01009407001 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.04 OrthoFinder output from all 47 species
GSVIVT01015466001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.05 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.05 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.04 OrthoFinder output from all 47 species
LOC_Os01g62910.1 CRR2, LOC_Os01g62910 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.04 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18287 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g58985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10317671g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Msp_g12189 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46650 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57077 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57944 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g61389 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63597 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12264 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53962 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007167 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-3162 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011851 OTP84 not classified & original description: CDS=1-2175 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017091 No alias not classified & original description: CDS=1-3111 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018966 No alias not classified & original description: CDS=1-2631 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019397 No alias not classified & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022166 No alias not classified & original description: CDS=1-2514 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022672 No alias not classified & original description: CDS=1-3558 0.03 OrthoFinder output from all 47 species
Sam_g11238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo134463 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Spa_g07054 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26788 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21292 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.04 OrthoFinder output from all 47 species
Zm00001e003284_P001 Zm00001e003284 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e024311_P001 Zm00001e024311 Pentatricopeptide repeat-containing protein At1g09410,... 0.03 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.02 OrthoFinder output from all 47 species
Zm00001e029450_P001 Zm00001e029450 Pentatricopeptide repeat-containing protein At2g46050,... 0.05 OrthoFinder output from all 47 species
Zm00001e030887_P001 Zm00001e030887 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.05 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.04 OrthoFinder output from all 47 species
Zm00001e035764_P001 Zm00001e035764 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 340 385
IPR002885 Pentatricopeptide_repeat 440 487
IPR002885 Pentatricopeptide_repeat 138 185
IPR002885 Pentatricopeptide_repeat 239 286
No external refs found!