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  5. Nbi_g07146

Nbi_g07146


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07146
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00254860 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00168910 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00033p00169500 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00278p00010750 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G47200 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G47210 No alias Plant protein of unknown function (DUF247) 0.03 OrthoFinder output from all 47 species
AT3G50170 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
Ala_g12369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08493.t1 Aspi01Gene08493 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29768.t1 Aspi01Gene29768 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48412.t1 Aspi01Gene48412 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene53577.t1 Aspi01Gene53577 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61845.t1 Aspi01Gene61845 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.06G018800.1 Ceric.06G018800 not classified & original description: pacid=50620702... 0.03 OrthoFinder output from all 47 species
Ceric.08G043100.1 Ceric.08G043100 not classified & original description: pacid=50638846... 0.03 OrthoFinder output from all 47 species
Ceric.30G007100.1 Ceric.30G007100 not classified & original description: pacid=50608898... 0.05 OrthoFinder output from all 47 species
Dac_g36449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14683 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g52521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017510001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_27805 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g21670.1 LOC_Os01g21670 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g42650.1 LOC_Os04g42650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g15230.1 LOC_Os05g15230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g08120.1 LOC_Os06g08120 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g30520.1 LOC_Os08g30520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g33970.1 LOC_Os11g33970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g34090.1 LOC_Os11g34090 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g29620.1 LOC_Os12g29620 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g29650.1 LOC_Os12g29650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g00358 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g38049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_314857g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_92471g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp7g16570.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Solyc09g009230.2.1 Solyc09g009230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g079520.1.1 Solyc10g079520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g079530.2.1 Solyc10g079530 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc12g099300.1.1 Solyc12g099300 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g06895 No alias not classified & original description: none 0.21 OrthoFinder output from all 47 species
Tin_g24072 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g24899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024232_P001 Zm00001e024232 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 53 493
No external refs found!