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  5. Nbi_g07209

Nbi_g07209


Description : not classified & original description: none


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07209

Target Alias Description ECC score Gene Family Method Actions
Als_g21139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g41657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0162.g054145 No alias not classified & original description: CDS=1-1809 0.03 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.33G026000.1 Ceric.33G026000 not classified & original description: pacid=50607594... 0.03 OrthoFinder output from all 47 species
Cre04.g213905 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g08281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11513 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39308 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g30370.1 LOC_Os10g30370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g18833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430689g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g19710.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g26171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009589 No alias not classified & original description: CDS=346-2226 0.03 OrthoFinder output from all 47 species
Spa_g10142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 232 290
IPR000504 RRM_dom 326 396
IPR029123 RBM39_linker 417 530
No external refs found!