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  5. Nbi_g07581

Nbi_g07581


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07581
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Ala_g16579 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16974 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70663.t2 OTP84, Aspi01Gene70663 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035815 No alias not classified & original description: CDS=1-2163 0.02 OrthoFinder output from all 47 species
Cba_g07770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G080700.1 CRR22, Ceric.06G080700 not classified & original description: pacid=50619986... 0.03 OrthoFinder output from all 47 species
Ceric.10G029700.1 Ceric.10G029700 not classified & original description: pacid=50613292... 0.04 OrthoFinder output from all 47 species
Ceric.24G003700.1 Ceric.24G003700 not classified & original description: pacid=50629583... 0.04 OrthoFinder output from all 47 species
Dcu_g08698 EMB2744 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g39970.1 LOC_Os09g39970 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g16432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48629 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38653 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04505 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016088 No alias not classified & original description: CDS=1-1020 0.04 OrthoFinder output from all 47 species
Sam_g03383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo98551 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 590 620
IPR002885 Pentatricopeptide_repeat 562 587
IPR002885 Pentatricopeptide_repeat 360 387
IPR002885 Pentatricopeptide_repeat 260 281
IPR002885 Pentatricopeptide_repeat 461 486
IPR002885 Pentatricopeptide_repeat 388 415
IPR046848 E_motif 909 955
IPR002885 Pentatricopeptide_repeat 857 889
IPR002885 Pentatricopeptide_repeat 289 331
IPR002885 Pentatricopeptide_repeat 687 736
IPR002885 Pentatricopeptide_repeat 790 836
IPR002885 Pentatricopeptide_repeat 487 533
No external refs found!