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  5. Nbi_g08040

Nbi_g08040 (ATEXPA10, AT-EXP10,...)


Aliases : ATEXPA10, AT-EXP10, ATEXP10, EXPA10, EXP10, ATHEXP ALPHA 1.1

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08040

Target Alias Description ECC score Gene Family Method Actions
Ala_g20858 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02221 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14978 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15347 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32812 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07935 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07936 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13450 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g44449 ATEXPA10,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03666.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03667.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04997.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51050.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00646 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08546 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15318 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14223 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01499 EXP15, ATEXPA15,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os04g44780.1 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g03215 EXPB3, ATEXPB3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43179 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54462 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Mp1g22740.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp2g18610.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g03930.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g12280.1 ATEXPA3, EXP3,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp4g06560.1 EXPA16, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Nbi_g02659 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05268 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22080 EXPB3, ATEXPB3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022152 EXPB3, ATEXPB3,... not classified & original description: CDS=169-1023 0.03 OrthoFinder output from all 47 species
Solyc05g052250.3.1 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Spa_g28880 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48546 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03825 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e037885_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 71 159
IPR007117 Expansin_CBD 170 247
No external refs found!