Aliases : PAL4
Description : EC_4.3 carbon-nitrogen lyase & original description: none
Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00202590 | ATPAL2, PAL2,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00148p00088930 | ATPAL1, PAL1,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G10340 | PAL4 | phenylalanine ammonia-lyase 4 | 0.02 | OrthoFinder output from all 47 species | |
| Als_g38575 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene05558.t1 | PAL4, Aspi01Gene05558 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene07514.t1 | PAL4, Aspi01Gene07514 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08202 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36866 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g18475 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g25215 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015140001 | ATPAL2, PAL2 | Phenylalanine ammonia-lyase OS=Pinus taeda | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024292001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024295001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025703001 | ATPAL2, PAL2 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g41650.3 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g50108 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429279g0010 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_15852g0010 | ATPAL2, PAL2 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g20938 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g29412 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21799 | ATPAL1, PAL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36179 | ATPAL2, PAL2 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c10_21810V3.1 | PAL4, Pp3c10_21810 | phenylalanine ammonia-lyase 4 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_7320V3.1 | Pp3c17_7320 | No annotation | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c21_7640V3.1 | ATPAL2, PAL2, Pp3c21_7640 | phenylalanine ammonia-lyase 2 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c21_7670V3.1 | PAL4, Pp3c21_7670 | phenylalanine ammonia-lyase 4 | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c24_13110V3.1 | PAL4, Pp3c24_13110 | phenylalanine ammonia-lyase 4 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g30570 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g007910.4.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.09 | OrthoFinder output from all 47 species | |
| Solyc10g086180.2.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 81 | 552 |
| No external refs found! |
