Nbi_g08816 (ABCB19, ATABCB19,...)

Aliases : ABCB19, ATABCB19, MDR1, MDR11, ATPGP19, ATMDR1, ATMDR11, PGP19

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g08816

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
AMTR_s00045p00108620	PGP11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00045p00109790	PGP11,...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00045p00109940	PGP11,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AMTR_s00049p00128390	PGP16,...	ABC transporter B family member 16 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AMTR_s00049p00128460	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT3G28415	No alias	ABC transporter family protein	0.02	OrthoFinder output from all 47 species
AT3G55320	PGP20	P-glycoprotein 20	0.02	OrthoFinder output from all 47 species
AT3G62150	PGP21	P-glycoprotein 21	0.03	OrthoFinder output from all 47 species
AT4G25960	PGP2	P-glycoprotein 2	0.04	OrthoFinder output from all 47 species
Adi_g029160	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g056650	ABCB19,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g058585	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g087061	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g105656	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g20043	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g11046	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g27372	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g29011	PGP10	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g33590	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Als_g18810	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g18811	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g16050	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g24344	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g24610	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g14003	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g19105	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12320.t2	PGP2, Aspi01Gene12320	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene62048.t1	PGP2, Aspi01Gene62048	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene62054.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62055.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.10G031400.1	PGP13, Ceric.10G031400	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g06939	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g09158	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13730	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01015306001	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_01718	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_07563	ABCB19,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_10211	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_10216	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_32125	PGP11	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_33057	ABCB19,...	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_33058	ABCB19,...	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Gb_36497	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_36503	No alias	serine carboxypeptidase. subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os01g35030.1	PGP11, LOC_Os01g35030	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Len_g56555	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g10739	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g25374	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10432922g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_111099g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_114017g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_636449g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_82945g0030	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp7g04390.1	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Msp_g17749	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g44397	No alias	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g29613	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29606	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g30543	PGP18	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33236	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g50526	PGP11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12991	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c17_16450V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291	PGP2	subfamily ABCB transporter & original description: CDS=1-4248	0.03	OrthoFinder output from all 47 species
Sam_g34538	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g48720	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo148837	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo231714	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo408755	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc07g064120.2.1	Solyc07g064120	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc12g098840.3.1	PGP11, Solyc12g098840	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Spa_g26470	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g30984	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g08424	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0006835	dicarboxylic acid transport	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015740	C4-dicarboxylate transport	IEP	HCCA
BP	GO:0015743	malate transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0016157	sucrose synthase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	413	561
IPR003439	ABC_transporter-like_ATP-bd	1070	1218
IPR011527	ABC1_TM_dom	733	1000
IPR011527	ABC1_TM_dom	74	343

External Links

No external refs found!

Nbi_g08816 (ABCB19, ATABCB19,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation