1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g09101

Nbi_g09101 (ATHB5, ATHB-5, HB5)


Aliases : ATHB5, ATHB-5, HB5

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09101

Target Alias Description ECC score Gene Family Method Actions
Als_g28218 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g63335 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g03981 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.14G007200.1 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01027407001 HB-7, ATHB-7, ATHB7 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
LOC_Os09g35910.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
MA_19453g0040 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Ore_g19819 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g48870 No alias HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc05g006980.3.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Zm00001e007381_P001 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Zm00001e015274_P001 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Zm00001e034785_P001 HB-12, ATHB-12,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 131 178
IPR001356 Homeobox_dom 76 130
No external refs found!