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  5. Nbi_g09104

Nbi_g09104


Description : not classified & original description: none


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00037390 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00128640 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aob_g39319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34497.t1 Aspi01Gene34497 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0334.g065497 No alias not classified & original description: CDS=1-1488 0.03 OrthoFinder output from all 47 species
Cba_g13201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z166900.1 Ceric.1Z166900 not classified & original description: pacid=50632887... 0.03 OrthoFinder output from all 47 species
Dac_g26357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g00910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g00950.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g080840.1.1 Solyc02g080840 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g080850.1.1 Solyc02g080850 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g15846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 41 360
No external refs found!