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  5. Nbi_g09118

Nbi_g09118 (SUA)


Aliases : SUA

Description : not classified & original description: none


Gene families : OG0002445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09118
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT3G54230 SUA suppressor of abi3-5 0.02 OrthoFinder output from all 47 species
Adi_g058381 SUA not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g102062 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06676 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37096 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22735 SUA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04658 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G052600.1 SUA, Ceric.22G052600 not classified & original description: pacid=50613886... 0.08 OrthoFinder output from all 47 species
Dac_g28893 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14899 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013204001 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g07229 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08592 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29782 SUA not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10091679g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_188532g0010 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Mp1g04870.1 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Ore_g07127 SUA not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g10790 SUA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g38762 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo407112 SUA SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc08g077310.3.1 SUA, Solyc08g077310 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g07600 SUA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028204_P003 SUA, Zm00001e028204 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e033409_P006 SUA, Zm00001e033409 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000467 G_patch_dom 995 1036
IPR041591 OCRE 638 687
IPR000504 RRM_dom 508 573
IPR000504 RRM_dom 351 411
No external refs found!