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  5. Nbi_g09486

Nbi_g09486 (tny)


Aliases : tny

Description : subgroup ERF-III transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09486

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00039760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G47220 ERF2, ATERF2, ATERF-2 ethylene responsive element binding factor 2 0.03 OrthoFinder output from all 47 species
Aev_g07817 No alias subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08226 ERF38, ATERF38 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19822 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g33839 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g09855 ORA47 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.05 OrthoFinder output from all 47 species
Als_g10439 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g13579 PUCHI subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g36093 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Aop_g69933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26705.t1 TINY2, Aspi01Gene26705 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene41136.t1 CRF3, Aspi01Gene41136 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53896.t1 ORA47, Aspi01Gene53896 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57065.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene59069.t1 RAP2.2, Aspi01Gene59069 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008023 No alias subgroup ERF-V transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029841 No alias not classified & original description: CDS=1-2064 0.04 OrthoFinder output from all 47 species
Azfi_s0263.g060857 LEP subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g04639 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g06839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G001500.1 DEAR2, Ceric.13G001500 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G053900.1 Ceric.13G053900 subgroup ERF-IX transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G080300.1 Ceric.13G080300 subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G030500.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.38G045600.1 Ceric.38G045600 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre08.g364400 RAP2.2 No description available 0.02 OrthoFinder output from all 47 species
Dac_g33609 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02635 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11768 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11814 DREB26 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Dcu_g16623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16669 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g33023 No alias subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01348 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Dde_g12764 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g10951 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ehy_g27325 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Ehy_g30923 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005747001 DRN-LIKE, ESR2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01021060001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_17008 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Gb_41445 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g10370.1 tny, LOC_Os01g10370 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g38090.1 ESR1, DRN, LOC_Os02g38090 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45420.1 LOC_Os02g45420 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g47590.1 ATERF3, ERF3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g22770.1 ERF1, ATERF1,... no description available(sp|a0a3q7i5y9|erfc3_sollc : 90.1) 0.03 OrthoFinder output from all 47 species
Len_g13845 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g34955 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g40989 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10274g0010 Rap2.6L transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_10430231g0010 WIN1, SHN1 transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
MA_132427g0010 No alias transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_15496g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_65985g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Msp_g04749 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g05472 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g06492 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12325 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g12537 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25476 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30591 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g02035 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g12944 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ore_g03908 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g07910 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g30106 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g40725 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g17077 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Pir_g18798 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g28144 DDF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37658 ERF5, ATERF-5, ATERF5 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11378 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12819 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g18571 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c10_11910V3.1 Pp3c10_11910 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c3_9430V3.1 ERF2, ATERF2,... ethylene responsive element binding factor 1 0.01 OrthoFinder output from all 47 species
Ppi_g07532 CRF3 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09795 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g22071 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g26637 tny not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42614 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004889 No alias not classified & original description: CDS=1-627 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006104 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013375 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Smo428344 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g090560.4.1 Solyc01g090560 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc03g116610.3.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Solyc03g117230.1.1 Solyc03g117230 Ethylene-responsive transcription factor ERF084... 0.04 OrthoFinder output from all 47 species
Solyc04g054910.4.1 Solyc04g054910 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc05g013540.1.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc05g050790.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc11g011750.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Tin_g20867 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29003 tny subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023686_P001 Zm00001e023686 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023870_P001 RAP2.4, Zm00001e023870 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e032032_P001 ATERF12, ERF12,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species
Zm00001e037404_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 48 98
No external refs found!