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  5. Nbi_g09678

Nbi_g09678 (IAA3, SHY2)


Aliases : IAA3, SHY2

Description : transcriptional repressor *(IAA/AUX) & original description: none


Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09678
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G80390 IAA15 indole-3-acetic acid inducible 15 0.03 OrthoFinder output from all 47 species
Aev_g05487 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07239 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0114.g046142 No alias not classified & original description: CDS=292-1128 0.04 OrthoFinder output from all 47 species
Cba_g11987 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G020600.1 IAA8, Ceric.29G020600 transcriptional repressor *(IAA/AUX) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g01587 IAA12, BDL transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015350001 IAA27, PAP2 Auxin-responsive protein IAA27 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_22660 IAA11 Auxin-responsive protein IAA11 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os02g49160.1 IAA31, LOC_Os02g49160 Auxin-responsive protein IAA8 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os03g58350.1 IAA3, SHY2,... Auxin-responsive protein IAA14 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_84793g0010 IAA13 Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_94744g0010 IAA13 Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g01098 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20021 AXR2, IAA7 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Smo85035 IAA16 Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Solyc04g076850.3.1 IAA9, Solyc04g076850 Auxin-responsive protein IAA9 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc06g084070.3.1 IAA4, ATAUX2-11,... Auxin-responsive protein IAA4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g083280.3.1 IAA4, ATAUX2-11,... Auxin-induced protein IAA4 OS=Pisum sativum... 0.03 OrthoFinder output from all 47 species
Solyc09g083290.3.1 AXR2, IAA7,... Auxin-responsive protein IAA14 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc09g090910.3.1 IAA13, Solyc09g090910 Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g096980.3.1 IAA13, Solyc12g096980 Auxin-responsive protein IAA12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g21406 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30845 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 94 452
No external refs found!