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  5. Nbi_g09710

Nbi_g09710


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09710

Target Alias Description ECC score Gene Family Method Actions
AT3G02330 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g15138 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ala_g16843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07040 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04243 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g05734 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19946 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23996 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32922 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g65854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene12870.t1 Aspi01Gene12870 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34727.t1 Aspi01Gene34727 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16716 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g67690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.08 OrthoFinder output from all 47 species
Ceric.30G012500.1 Ceric.30G012500 not classified & original description: pacid=50608997... 0.02 OrthoFinder output from all 47 species
Ceric.30G017300.1 Ceric.30G017300 not classified & original description: pacid=50608904... 0.06 OrthoFinder output from all 47 species
Dac_g22002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35356 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35456 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22173 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26019 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35433 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13001 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14702 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g15174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_18165g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013713 EMB2758 not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021374 No alias not classified & original description: CDS=1-1881 0.01 OrthoFinder output from all 47 species
Sam_g23897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g29816 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g38689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 804 855
IPR002885 Pentatricopeptide_repeat 361 384
IPR002885 Pentatricopeptide_repeat 588 618
IPR002885 Pentatricopeptide_repeat 487 513
IPR002885 Pentatricopeptide_repeat 459 486
IPR002885 Pentatricopeptide_repeat 661 686
IPR002885 Pentatricopeptide_repeat 387 433
IPR002885 Pentatricopeptide_repeat 285 333
IPR002885 Pentatricopeptide_repeat 687 733
No external refs found!