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  5. Nbi_g10233

Nbi_g10233


Description : not classified & original description: none


Gene families : OG0000168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10233
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G19320 No alias Pathogenesis-related thaumatin superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G77700 No alias Pathogenesis-related thaumatin superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G40020 No alias Pathogenesis-related thaumatin superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g08001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008918001 No alias Thaumatin-like protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01019848001 No alias Pathogenesis-related protein R major form OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01038679001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os06g47600.1 LOC_Os06g47600 Thaumatin-like protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g15682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003914 No alias not classified & original description: CDS=828-1658 0.03 OrthoFinder output from all 47 species
Solyc01g104290.3.1 Solyc01g104290 no description available(sp|q5dwg1|crj35_cryja : 226.0) 0.04 OrthoFinder output from all 47 species
Solyc03g079960.4.1 Solyc03g079960 no description available(sp|q9ff29|pr5k_arath : 239.0) 0.04 OrthoFinder output from all 47 species
Solyc04g081560.3.1 Solyc04g081560 Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g073000.4.1 Solyc06g073000 no description available(sp|q9ff29|pr5k_arath : 245.0) 0.04 OrthoFinder output from all 47 species
Solyc11g013300.2.1 Solyc11g013300 no description available(sp|q5dwg1|crj35_cryja : 239.0) 0.04 OrthoFinder output from all 47 species
Spa_g01941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010095_P001 Zm00001e010095 Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001938 Thaumatin 41 257
No external refs found!