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  5. Nbi_g10283

Nbi_g10283


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10283

Target Alias Description ECC score Gene Family Method Actions
Adi_g035521 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27912 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene16353.t1 Aspi01Gene16353 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34104.t1 OTP84, Aspi01Gene34104 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34811.t1 Aspi01Gene34811 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67429.t2 Aspi01Gene67429 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015535 OTP86 not classified & original description: CDS=1-2652 0.05 OrthoFinder output from all 47 species
Azfi_s0519.g075227 No alias not classified & original description: CDS=1-1455 0.05 OrthoFinder output from all 47 species
Cba_g30006 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37893 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.20G008800.1 Ceric.20G008800 not classified & original description: pacid=50566037... 0.04 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.05 OrthoFinder output from all 47 species
Len_g17998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07021 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34246 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo91949 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Zm00001e016542_P001 Zm00001e016542 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 180 228
IPR002885 Pentatricopeptide_repeat 382 430
IPR002885 Pentatricopeptide_repeat 484 531
IPR002885 Pentatricopeptide_repeat 791 833
IPR002885 Pentatricopeptide_repeat 588 632
IPR002885 Pentatricopeptide_repeat 660 686
IPR002885 Pentatricopeptide_repeat 357 377
IPR002885 Pentatricopeptide_repeat 284 314
IPR002885 Pentatricopeptide_repeat 256 280
IPR002885 Pentatricopeptide_repeat 688 718
IPR002885 Pentatricopeptide_repeat 558 581
No external refs found!