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  5. Nbi_g10419

Nbi_g10419


Description : component *(eL32) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10419

Target Alias Description ECC score Gene Family Method Actions
AT4G18100 No alias Ribosomal protein L32e 0.04 OrthoFinder output from all 47 species
AT5G46430 No alias Ribosomal protein L32e 0.02 OrthoFinder output from all 47 species
Als_g40647 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.22G081000.1 Ceric.22G081000 component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.39G032400.1 Ceric.39G032400 component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre06.g289550 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01021377001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Gb_36437 No alias component RPL32 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os08g41300.1 LOC_Os08g41300 component RPL32 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os09g32500.1 LOC_Os09g32500 component RPL32 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os09g32520.1 LOC_Os09g32520 component RPL32 of LSU proteome component 0.05 OrthoFinder output from all 47 species
LOC_Os09g32532.1 LOC_Os09g32532 component RPL32 of LSU proteome component 0.04 OrthoFinder output from all 47 species
MA_41569g0010 No alias component RPL32 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp7g12480.1 No alias component RPL32 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Msp_g34354 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g03230 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pp3c11_25130V3.1 Pp3c11_25130 Ribosomal protein L32e 0.01 OrthoFinder output from all 47 species
Pp3c1_32490V3.1 Pp3c1_32490 Ribosomal protein L32e 0.03 OrthoFinder output from all 47 species
Ppi_g26130 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g23346 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g39443 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo146656 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc02g150130.1.1 Solyc02g150130 component RPL32 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc08g006900.3.1 Solyc08g006900 component RPL32 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Spa_g02483 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g17123 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g11973 No alias component *(eL32) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e010105_P002 Zm00001e010105 component RPL32 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e021938_P001 Zm00001e021938 component RPL32 of LSU proteome component 0.05 OrthoFinder output from all 47 species
Zm00001e034604_P001 Zm00001e034604 component RPL32 of LSU proteome component 0.06 OrthoFinder output from all 47 species
Zm00001e034606_P001 Zm00001e034606 component RPL32 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001515 Ribosomal_L32e 16 122
No external refs found!