Nbi_g10475

Description : not classified & original description: none

Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g10475

Target	Alias	Description	ECC score	Gene Family Method
Adi_g020451	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g103586	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g01998	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Dde_g08151	RHC1A	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Gb_22125	No alias	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp7g15970.1	No alias	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Pir_g09671	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g56162	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000146	No alias	not classified & original description: CDS=228-1322	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019777	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020256	No alias	not classified & original description: CDS=1-1698	0.02	OrthoFinder output from all 47 species
Sam_g05103	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR039525	RNF126-like_zinc-ribbon	6	36
IPR001841	Znf_RING	214	256

External Links

No external refs found!