1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g11081

Nbi_g11081 (AtCRT1a, CRT1a, CRT1)


Aliases : AtCRT1a, CRT1a, CRT1

Description : ER luminal lectin chaperone *(CRT) & original description: none


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11081
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT1G56340 AtCRT1a, CRT1a, CRT1 calreticulin 1a 0.03 OrthoFinder output from all 47 species
Adi_g011348 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.05 OrthoFinder output from all 47 species
Adi_g054253 AtCRT3, EBS2, CRT3, PSL1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21047 CRT1b, AtCRT1b ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10127 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02547 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32785.t1 AtCRT3, EBS2,... ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Cre01.g038400 AtCRT1a, CRT1a, CRT1 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Dcu_g18966 PIP5K9 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Gb_07615 AtCRT1a, CRT1a, CRT1 lectin chaperone (CRT) 0.05 OrthoFinder output from all 47 species
Len_g21856 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.03 OrthoFinder output from all 47 species
Lfl_g02942 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g12186 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10428523g0010 CRT1b, AtCRT1b Calreticulin OS=Ricinus communis (sp|p93508|calr_ricco : 141.0) 0.03 OrthoFinder output from all 47 species
Ppi_g32686 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39878 No alias ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100380.4.1 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 265 338
IPR001580 Calret/calnex 28 263
No external refs found!