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  5. Nbi_g11876

Nbi_g11876 (HSFA1B, ATHSF3, HSF3, ATHSFA1B)


Aliases : HSFA1B, ATHSF3, HSF3, ATHSFA1B

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11876
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270580 AT-HSFA6B,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00270590 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00209530 HSFA1E,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
AMTR_s00132p00118400 HSF4, HSFB1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
AT1G77570 No alias Winged helix-turn-helix transcription repressor DNA-binding 0.03 OrthoFinder output from all 47 species
AT4G18880 HSF A4A, AT-HSFA4A heat shock transcription factor A4A 0.03 OrthoFinder output from all 47 species
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.05 OrthoFinder output from all 47 species
Ala_g06411 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g24142 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30082 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05891 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07907 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30579.t1 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45768.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G078200.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g13990 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01002066001 AT-HSFB2A, HSFB2A RNA biosynthesis.transcriptional activation.HSF (heat... 0.05 OrthoFinder output from all 47 species
GSVIVT01033257001 AT-HSFB3, HSFB3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.07 OrthoFinder output from all 47 species
LOC_Os03g25120.1 HSFB4, SCZ,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g45410.1 HSF A4A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g28354.1 HSF4, HSFB1,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Len_g29724 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_110587g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Msp_g21406 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11679 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30346 HSF A4A, AT-HSFA4A HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30272 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07494 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000353 HSFA1E, ATHSFA1E HSF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g14010 No alias HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g016000.3.1 AT-HSFB3, HSFB3,... transcription factor (HSF) 0.07 OrthoFinder output from all 47 species
Solyc06g053950.3.1 AT-HSFA6B,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g053960.3.1 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc07g055710.3.1 HSFA4C, RHA1,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc10g079380.2.1 AT-HSFB3, HSFB3,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Spa_g48007 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07369 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 15 104
No external refs found!