Description : component *(uL1c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0002232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002232_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00107p00035950 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.09 | OrthoFinder output from all 47 species | |
| AT3G63490 | No alias | Ribosomal protein L1p/L10e family | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g083284 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g11306 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.12 | OrthoFinder output from all 47 species | |
| Ala_g13358 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Aob_g31675 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Aop_g11179 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Aspi01Gene55148.t1 | Aspi01Gene55148 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene55149.t1 | Aspi01Gene55149 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035757 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.36G042400.1 | Ceric.36G042400 | component *(uL1c) of large plastid ribosomal-subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Cre02.g088900 | No alias | Protein biosynthesis.organelle translation... | 0.1 | OrthoFinder output from all 47 species | |
| Dac_g00779 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g06155 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g12366 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01020727001 | No alias | Protein biosynthesis.organelle translation... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01032196001 | No alias | Protein biosynthesis.organelle translation... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_16169 | No alias | component psRPL1 of large ribosomal subunit proteome | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os05g32220.1 | LOC_Os05g32220 | component psRPL1 of large ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
| Len_g24587 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g03897 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g19309 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10002614g0010 | No alias | 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| MA_310797g0010 | No alias | 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g07500.1 | No alias | component psRPL1 of large ribosomal subunit proteome | 0.11 | OrthoFinder output from all 47 species | |
| Msp_g12689 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g28354 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g01275 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c23_11170V3.1 | Pp3c23_11170 | Ribosomal protein L1p/L10e family | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g41124 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0154.g023589 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g18339 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Smo143134 | No alias | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g16769 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Tin_g00638 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
| Zm00001e031570_P001 | Zm00001e031570 | component psRPL1 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| BP | GO:0034311 | diol metabolic process | IEP | HCCA |
| BP | GO:0034312 | diol biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028364 | Ribosomal_L1/biogenesis | 137 | 327 |
| No external refs found! |
