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  5. Nbi_g12033

Nbi_g12033


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12033

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00236720 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.04 OrthoFinder output from all 47 species
AT1G12440 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.06 OrthoFinder output from all 47 species
Adi_g012490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15721 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g39179 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g01093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g36988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05101 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13334.t1 Aspi01Gene13334 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25155.t1 Aspi01Gene25155 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26100.t1 Aspi01Gene26100 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g49084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G040000.1 Ceric.03G040000 not classified & original description: pacid=50571445... 0.03 OrthoFinder output from all 47 species
Ceric.1Z032000.1 Ceric.1Z032000 not classified & original description: pacid=50577072... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021489.30 No alias Zinc finger A20 and AN1 domain-containing... 0.01 OrthoFinder output from all 47 species
Dac_g10909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032065001 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Gb_14283 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os02g32840.1 LOC_Os02g32840 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os05g23470.1 LOC_Os05g23470 Zinc finger AN1 domain-containing stress-associated... 0.02 OrthoFinder output from all 47 species
LOC_Os08g39450.1 LOC_Os08g39450 Zinc finger A20 and AN1 domain-containing... 0.06 OrthoFinder output from all 47 species
LOC_Os09g31200.1 LOC_Os09g31200 Zinc finger A20 and AN1 domain-containing... 0.06 OrthoFinder output from all 47 species
Len_g03084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26226 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g26227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g41157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013704 No alias not classified & original description: CDS=1-681 0.02 OrthoFinder output from all 47 species
Sam_g26628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo150464 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Solyc01g086960.3.1 Solyc01g086960 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Solyc08g079700.3.1 Solyc08g079700 Zinc finger A20 and AN1 domain-containing... 0.04 OrthoFinder output from all 47 species
Solyc09g009590.1.1 Solyc09g009590 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Solyc11g061770.2.1 Solyc11g061770 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Spa_g12005 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g17585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55152 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27744 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e003512_P001 Zm00001e003512 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e034520_P001 Zm00001e034520 Zinc finger A20 and AN1 domain-containing... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 156 191
IPR002653 Znf_A20 19 42
No external refs found!