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  5. Nbi_g12236

Nbi_g12236 (CYCT1;4)


Aliases : CYCT1;4

Description : regulatory component *(CYCT) of CTDK-I polymerase-II kinase complex & original description: none


Gene families : OG0000467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12236
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Adi_g060883 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g20791 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Als_g27525 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Aob_g06020 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.04 OrthoFinder output from all 47 species
Aop_g10825 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043634 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Ceric.08G071000.1 CYCT1;4, Ceric.08G071000 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.09G013400.1 CYCT1;4, Ceric.09G013400 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.17G065700.1 CYCT1;4, Ceric.17G065700 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Ceric.32G005000.1 CYCT1;4, Ceric.32G005000 regulatory protein *(CYCT) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.112 CYCT1;4 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.01 OrthoFinder output from all 47 species
Cre10.g453050 No alias Cyclin-T1-4 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Dac_g07410 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.05 OrthoFinder output from all 47 species
Dde_g24859 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.04 OrthoFinder output from all 47 species
Len_g19070 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Mp3g00720.1 CYCT1;4 cyclin (CYCT). regulatory component of CTDK-I... 0.02 OrthoFinder output from all 47 species
Pir_g17325 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g06892 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g08960 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003181 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 47 167
No external refs found!