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  5. Nbi_g12269

Nbi_g12269 (ATCCD1, CCD1, NCED1, ATNCED1)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1

Description : EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & original description: none


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12269

Target Alias Description ECC score Gene Family Method Actions
AT3G63520 ATCCD1, CCD1,... carotenoid cleavage dioxygenase 1 0.05 OrthoFinder output from all 47 species
Adi_g025413 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aev_g06068 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ala_g04422 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Als_g04634 ATCCD1, CCD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27543 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Aob_g17438 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aop_g12925 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Aspi01Gene29851.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54185.t1 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ceric.01G106600.1 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000949.24 ATCCD1, CCD1,... No description available 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001128.6 ATCCD1, CCD1,... No description available 0.02 OrthoFinder output from all 47 species
Dcu_g11056 ATNCED5, NCED5 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dcu_g19844 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dcu_g22679 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dde_g10912 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g12236 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
LOC_Os02g47510.1 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.02 OrthoFinder output from all 47 species
LOC_Os12g44310.1 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.04 OrthoFinder output from all 47 species
Len_g08813 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Lfl_g10843 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
MA_10435932g0010 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.04 OrthoFinder output from all 47 species
MA_7919416g0010 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase 1... 0.02 OrthoFinder output from all 47 species
MA_863589g0010 ATCCD1, CCD1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g43568 ATCCD1, CCD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27316 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Pir_g56768 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g63649 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Sam_g25579 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Spa_g15685 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Spa_g51401 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Zm00001e038960_P002 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 65 541
No external refs found!