Nbi_g12396

Description : not classified & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g12396
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00176570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
AT1G12980	ESR1, DRN	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g079021	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aop_g55712	ERF-6-6, ERF6, ATERF6	subgroup ERF-IX transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g05355	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g08138	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ehy_g19945	No alias	subgroup ERF-V transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g22214	tny	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g23206	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g27343	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g29769	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.04	OrthoFinder output from all 47 species
Msp_g25672	DREB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g07909	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g41510	RAP2.11	transcription factor *(ERN1) & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g21385	PUCHI	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ppi_g11929	DEAR2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13453	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g15852	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Ppi_g17857	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g63080	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc05g013540.1.1	DRN-LIKE, ESR2,...	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Spa_g09063	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g09064	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Tin_g08460	No alias	subgroup ERF-III transcription factor & original...	0.08	OrthoFinder output from all 47 species
Tin_g11217	No alias	subgroup ERF-I transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g32520	RAP2.6	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e035811_P001	PUCHI, Zm00001e035811	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	257	306

External Links

No external refs found!

Nbi_g12396

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation