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  5. Nbi_g12476

Nbi_g12476


Description : not classified & original description: none


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12476

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00189750 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
AT5G67385 No alias Phototropic-responsive NPH3 family protein 0.02 OrthoFinder output from all 47 species
Ala_g18363 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g03145 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.07 OrthoFinder output from all 47 species
Aop_g12703 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene43240.t1 Aspi01Gene43240 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Aspi01Gene66522.t1 Aspi01Gene66522 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001664 No alias not classified & original description: CDS=1-2625 0.03 OrthoFinder output from all 47 species
Cba_g20694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G078000.1 Ceric.09G078000 not classified & original description: pacid=50587188... 0.04 OrthoFinder output from all 47 species
Dac_g08261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13792 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
Gb_00052 RPT2 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_15614 No alias BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
LOC_Os03g22600.1 LOC_Os03g22600 BTB/POZ domain-containing protein At1g03010... 0.06 OrthoFinder output from all 47 species
Len_g58450 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
MA_10429476g0010 RPT2 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_842546g0010 No alias BTB/POZ domain-containing protein At5g48800... 0.03 OrthoFinder output from all 47 species
Msp_g07382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14417 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Nbi_g04368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03886 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Ppi_g17400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g28022 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g064720.3.1 Solyc02g064720 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g061250.4.1 Solyc09g061250 BTB/POZ domain-containing protein At5g48800... 0.03 OrthoFinder output from all 47 species
Spa_g46290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 261 547
IPR000210 BTB/POZ_dom 29 133
No external refs found!