Nbi_g13003 (ATWRKY65, WRKY65)

Aliases : ATWRKY65, WRKY65

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g13003

Target	Alias	Description	ECC score	Gene Family Method
AT1G30650	WRKY14, AR411, ATWRKY14	WRKY DNA-binding protein 14	0.02	OrthoFinder output from all 47 species
Adi_g009825	No alias	WRKY-type transcription factor & original description: none	0.1	OrthoFinder output from all 47 species
Ala_g26847	ATWRKY65, WRKY65	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g28143	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20552	WRKY21	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g23532	WRKY14, AR411, ATWRKY14	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0006.g010291	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Azfi_s0028.g023846	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.03G053600.1	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g08172	ATWRKY65, WRKY65	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g16824	WRKY15	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g21098	ATWRKY11, WRKY11	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g58420.1	WRKY21, LOC_Os03g58420	transcription factor (WRKY)	0.08	OrthoFinder output from all 47 species
LOC_Os04g51560.1	ATWRKY11,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g50700.1	WRKY22,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_10428170g0010	WRKY21	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Ore_g28236	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29388	WRKY74, ATWRKY74	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g31609	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g055280.4.1	ATWRKY69,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Solyc08g081610.4.1	ATWRKY29,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g03774	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g18969	WRKY21	WRKY-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Spa_g41197	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g51490	WRKY15	WRKY-type transcription factor & original description: none	0.12	OrthoFinder output from all 47 species
Tin_g15422	WRKY14, AR411, ATWRKY14	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e019908_P001	ATWRKY69,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	244	301

External Links

No external refs found!

Nbi_g13003 (ATWRKY65, WRKY65)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation